BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036C12SP1|AL430207
(933 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1661 1391 0.0
>3x_Contig1661
Length = 14612
Score = 1391 bits (701), Expect = 0.0
Identities = 704/706 (99%)
Strand = Plus / Plus
Query: 228 tgtattaatttataacattataatatgactatgcaggtaacttccaagctaccgggatac 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tgtattaatttataacattataatatgactatgcaggtaacttccaagctaccgggatac 69
Query: 288 aaccgatttatataagagagtatatatcattaacgtttcccaaatataaacattgatgga 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 aaccgatttatataagagagtatatatcattaacgtttcccaaatataaacattgatgga 129
Query: 348 gaaacgatgggaaaggaggtacttctatccgaatganattatggatgtgagaagaagtca 407
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 130 gaaacgatgggaaaggaggtacttctatccgaatgaaattatggatgtgagaagaagtca 189
Query: 408 cccttgtggttcacaaatatgtcaatagcggccatggctgcatatagtctattttctgct 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cccttgtggttcacaaatatgtcaatagcggccatggctgcatatagtctattttctgct 249
Query: 468 tcttcgaaaacaatggagtttttaccgtagaagacttcttccgtaacttcttcctggtgt 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tcttcgaaaacaatggagtttttaccgtagaagacttcttccgtaacttcttcctggtgt 309
Query: 528 cttggtaaacaatgcatgartttatagtttggtgcagcaacagaacatagttctgaatta 587
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cttggtaaacaatgcatgaatttatagtttggtgcagcaacagaacatagttctgaatta 369
Query: 588 atttggaacccagcaaattgtcttaatttagcttccttagcgaattcttcacccatggaa 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atttggaacccagcaaattgtcttaatttagcttccttagcgaattcttcacccatggaa 429
Query: 648 acaaaagtgtctgtcaccaagatattagcgtctgtacaagcagccatcgaatcatgagtg 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 acaaaagtgtctgtcaccaagatattagcgtctgtacaagcagccatcgaatcatgagtg 489
Query: 708 cagacaaactcacagttgttctgagcagctaatttttgaccctcttgttggatgtcgctg 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cagacaaactcacagttgttctgagcagctaatttttgaccctcttgttggatgtcgctg 549
Query: 768 tccaattcaatacctggaggagtggctacggcgacatcgatccccagtttcaaagcagca 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tccaattcaatacctggaggagtggctacggcgacatcgatccccagtttcaaagcagca 609
Query: 828 atagccatatcgttaatcacattgttggcatcaccaacccaagccatcttcaatttattg 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 atagccatatcgttaatcacattgttggcatcaccaacccaagccatcttcaatttattg 669
Query: 888 ttatcgtagtccaaatgttccttaatggtcaacatatcacaaatgg 933
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ttatcgtagtccaaatgttccttaatggtcaacatatcacaaatgg 715
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6394
Number of Sequences: 1807
Number of extensions: 6394
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)